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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831085.1_cds_XP_016504368.1_17821
CDS Infomation

[gene=LOC107822352] [db_xref=GeneID:107822352] [protein=exopolygalacturonase clone GBGE184-like] [protein_id=XP_016504368.1] [location=complement(join(10378..10602,11418..11637,12108..12189,12302..12509,13100..13408,14526..14687))] [gbkey=CDS]
Sequence

ATGGCTATTCCAAAAGAATTATTGGTTTTACTTTTGGGTATAGCCATTTTGTCAAAAGTT
GCTGAATGTGCAGCTTTTGGTTCACGTCGTGGCCTTGTCGAGACAGTTTTTGATGTTACC
AGGTTTGGAGCTAGACCAAATACCCCTGCAGATAGCACTAGGGGACTTATGATGGCATGG
AGATCAGCTTGCCAATCACCAGGACCGGCCAAAGTTGTTATTCCTCCAGGAACATACACT
ACAGGAGAAACTATATTTCAAGGGCCATGCACTAGTCCTAGGCCAATTACTATTGAAATT
CAAGGAACTTTGTTGTCAAATACTGACATGAGTTTGTACACAAGAGCAGCTTGGATTTCT
ATAGAACATGTAGATGGCATCGTTATTACGGGTGGAGGAACTCTAAATGGACAAGGAAAA
TCGAGTTGGCAATTTGCTGATAAATCTGGAAGTACCCCTCCTCTCCCCTCTTCTCTTGTA
TTTCAGACAGTGCGAAGTTCTTCGATCAAGAACCTCAATTTTGTGGATGCCAAAGGTGTC
CACTTGAAAATCACCGATAGCAGTGACATCTCAGTTTCAAATATCAAAATTACAGCTCCA
GGAGATAGTCCAAACACTGATGGTCTTCATATTAGTGATACAATTAATGTCAATGTCACT
GATAGCACCATTGGAACAGGTGACGATTGCATCAGTATTGGAGATGGCAATTCTAATGTT
TATATCTCTAACATAAATTGTGGCCCGGGACATGGAATAAGCATCGGCAGCCTTGGGAAA
AGGTTAGATGAAACGGACGTTAAAGGAGTTACAGTAAGAAACTGTACATTCCGTGGTACA
ACAAATGGTGCAAGAATCAAAACTTATATGGGCTCACCTTCACTACAAGTTTCTGGTGTT
GTTTATGAAGATATAATCCTGGATAATGTTAAAAATCCCATAGTTATTGATCAACACTAT
CATTCCAAGAACAGGAATGAGCCATCTAGAGTGAAACTGGTGGATATTCACTTCAGGAAC
ATAAGGGGAACAACAACTTCAAAAATTCCAGTGTTACTCAATTGCAGTGAAGCACTTCCC
TGTGAAGGAGTTGAATTGGTTGACATTGATCTAGCTCCAGTTGGTTCAATTGGACCTCTT
TTGCCTGCAACTTGTCAAAATGCCAAAACAATATTGAATGGAAAAAATAACCCGCCAGCA
TGCTGA

Peptide Sequence

PEP ID

XP_016504368.1
PEP Infomation

PREDICTED: exopolygalacturonase clone GBGE184-like [Nicotiana tabacum]
Sequence

MAIPKELLVLLLGIAILSKVAECAAFGSRRGLVETVFDVTRFGARPNTPADSTRGLMMAW
RSACQSPGPAKVVIPPGTYTTGETIFQGPCTSPRPITIEIQGTLLSNTDMSLYTRAAWIS
IEHVDGIVITGGGTLNGQGKSSWQFADKSGSTPPLPSSLVFQTVRSSSIKNLNFVDAKGV
HLKITDSSDISVSNIKITAPGDSPNTDGLHISDTINVNVTDSTIGTGDDCISIGDGNSNV
YISNINCGPGHGISIGSLGKRLDETDVKGVTVRNCTFRGTTNGARIKTYMGSPSLQVSGV
VYEDIILDNVKNPIVIDQHYHSKNRNEPSRVKLVDIHFRNIRGTTTSKIPVLLNCSEALP
CEGVELVDIDLAPVGSIGPLLPATCQNAKTILNGKNNPPAC

Transcript Sequence

Gene sequence data has not been registered.